STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR23828.1Hypothetical protein; COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes. (296 aa)    
Predicted Functional Partners:
EAR25261.1
Multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
  
  
 0.927
EAR25265.1
Hypothetical protein.
  
   0.760
EAR26135.1
Hypothetical protein.
  
     0.688
EAR23829.1
Hypothetical protein.
 
     0.682
EAR24051.1
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
    0.680
EAR26147.1
Membrane protein.
  
     0.666
EAR25408.1
COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
   
 0.648
EAR25612.1
COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
   
 0.648
EAR24891.1
Hypothetical protein.
  
     0.609
EAR25003.1
Hypothetical membrane protein; COG0038 Chloride channel protein EriC.
  
     0.587
Your Current Organism:
actinobacterium PHSC20C1
NCBI taxonomy Id: 312284
Other names: m. actinobacterium PHSC20C1, marine actinobacterium PHSC20C1, marine actinobacterium str. PHSC20C1, marine actinobacterium strain PHSC20C1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.