Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VF_0510 | VF_0511 | VF_0510 | VF_0511 | Fimbrial protein precursor. | Hypothetical protein. | 0.864 |
VF_0510 | VF_0513 | VF_0510 | VF_0513 | Fimbrial protein precursor. | General secretion pathway protein D; Belongs to the bacterial secretin family. | 0.829 |
VF_0510 | VF_0515 | VF_0510 | VF_0515 | Fimbrial protein precursor. | ATPase involved in chromosome partitioning. | 0.626 |
VF_0510 | VF_A0222 | VF_0510 | VF_A0222 | Fimbrial protein precursor. | ATPase involved in chromosome partitioning. | 0.649 |
VF_0510 | flp1 | VF_0510 | VF_0512 | Fimbrial protein precursor. | Flp pilus assembly protein CpaB family. | 0.905 |
VF_0510 | tadA1 | VF_0510 | VF_0516 | Fimbrial protein precursor. | Putative type IV secretion NTPase; Similar to TadA. | 0.714 |
VF_0510 | tadB1 | VF_0510 | VF_0517 | Fimbrial protein precursor. | TadB-like protein involved in pilus formation and/or protein secretion. | 0.749 |
VF_0510 | tadC1 | VF_0510 | VF_0518 | Fimbrial protein precursor. | Bipartite nuclear localization signal containing protein; Similar to TadC. | 0.695 |
VF_0511 | VF_0510 | VF_0511 | VF_0510 | Hypothetical protein. | Fimbrial protein precursor. | 0.864 |
VF_0511 | VF_0513 | VF_0511 | VF_0513 | Hypothetical protein. | General secretion pathway protein D; Belongs to the bacterial secretin family. | 0.834 |
VF_0511 | VF_0515 | VF_0511 | VF_0515 | Hypothetical protein. | ATPase involved in chromosome partitioning. | 0.642 |
VF_0511 | VF_A0222 | VF_0511 | VF_A0222 | Hypothetical protein. | ATPase involved in chromosome partitioning. | 0.507 |
VF_0511 | flp1 | VF_0511 | VF_0512 | Hypothetical protein. | Flp pilus assembly protein CpaB family. | 0.903 |
VF_0511 | tadA1 | VF_0511 | VF_0516 | Hypothetical protein. | Putative type IV secretion NTPase; Similar to TadA. | 0.638 |
VF_0511 | tadB1 | VF_0511 | VF_0517 | Hypothetical protein. | TadB-like protein involved in pilus formation and/or protein secretion. | 0.781 |
VF_0511 | tadC1 | VF_0511 | VF_0518 | Hypothetical protein. | Bipartite nuclear localization signal containing protein; Similar to TadC. | 0.638 |
VF_0513 | VF_0510 | VF_0513 | VF_0510 | General secretion pathway protein D; Belongs to the bacterial secretin family. | Fimbrial protein precursor. | 0.829 |
VF_0513 | VF_0511 | VF_0513 | VF_0511 | General secretion pathway protein D; Belongs to the bacterial secretin family. | Hypothetical protein. | 0.834 |
VF_0513 | VF_0515 | VF_0513 | VF_0515 | General secretion pathway protein D; Belongs to the bacterial secretin family. | ATPase involved in chromosome partitioning. | 0.875 |
VF_0513 | VF_A0222 | VF_0513 | VF_A0222 | General secretion pathway protein D; Belongs to the bacterial secretin family. | ATPase involved in chromosome partitioning. | 0.863 |
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