STRINGSTRING
VF_1542 protein (Vibrio fischeri) - STRING interaction network
"VF_1542" - Acetyltransferase in Vibrio fischeri
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VF_1542Acetyltransferase (158 aa)    
Predicted Functional Partners:
VF_1541
Phosphohydrolase (490 aa)
 
          0.873
VF_1326
Acetyltransferase (199 aa)
     
 
  0.810
luxD
Acyl transferase; Acyl transferase is part of the fatty acid reductase system required for aldehyde biosynthesis; it produces fatty acids for the luminescent reaction (307 aa)
         
    0.800
VF_A0653
IAA acetyltransferase (150 aa)
         
    0.800
VF_A0626
Acetyltransferase (144 aa)
         
    0.800
VF_A0115
Acetyltransferase (178 aa)
         
    0.800
VF_0977
Acetyltransferase (140 aa)
         
    0.800
VF_0200
Acetyltransferase (317 aa)
         
    0.800
yiiD
Acetyltransferase (299 aa)
         
    0.800
VF_1629
Hypothetical protein (258 aa)
   
          0.756
Your Current Organism:
Vibrio fischeri
NCBI taxonomy Id: 312309
Other names: A. fischeri, Achromobacter fischeri, Aliivibrio fischeri, Aliivibrio fischeri ES114, Bacillus fischeri, Bacillus phosphorescens indigenus, Einheimischer Leuchtbacillus, Microspira fischeri, Microspira marina, Photobacterium fischeri, V. fischeri ES114, Vibrio fischeri, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114, Vibrio noctiluca
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