Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VF_1416 | VF_1520 | VF_1416 | VF_1520 | Tetratricopeptide repeat family protein. | Hypothetical protein. | 0.679 |
VF_1416 | VF_1542 | VF_1416 | VF_1542 | Tetratricopeptide repeat family protein. | Acetyltransferase. | 0.629 |
VF_1416 | VF_1629 | VF_1416 | VF_1629 | Tetratricopeptide repeat family protein. | Hypothetical protein. | 0.669 |
VF_1416 | VF_2497 | VF_1416 | VF_2497 | Tetratricopeptide repeat family protein. | Hypothetical protein. | 0.754 |
VF_1416 | VF_A0037 | VF_1416 | VF_A0037 | Tetratricopeptide repeat family protein. | Hypothetical protein. | 0.731 |
VF_1416 | VF_A0207 | VF_1416 | VF_A0207 | Tetratricopeptide repeat family protein. | Hypothetical protein. | 0.585 |
VF_1416 | VF_A1171 | VF_1416 | VF_A1171 | Tetratricopeptide repeat family protein. | ParB family protein; Belongs to the ParB family. | 0.739 |
VF_1416 | rstA | VF_1416 | VF_A0581 | Tetratricopeptide repeat family protein. | RstA2 protein; Cryptic phage CTXphi. | 0.700 |
VF_1416 | sypJ | VF_1416 | VF_A1029 | Tetratricopeptide repeat family protein. | Glycosyl transferases group 1; Syp polysaccharide locus. | 0.689 |
VF_1520 | VF_1416 | VF_1520 | VF_1416 | Hypothetical protein. | Tetratricopeptide repeat family protein. | 0.679 |
VF_1520 | VF_1542 | VF_1520 | VF_1542 | Hypothetical protein. | Acetyltransferase. | 0.692 |
VF_1520 | VF_1629 | VF_1520 | VF_1629 | Hypothetical protein. | Hypothetical protein. | 0.740 |
VF_1520 | VF_2497 | VF_1520 | VF_2497 | Hypothetical protein. | Hypothetical protein. | 0.770 |
VF_1520 | VF_A0037 | VF_1520 | VF_A0037 | Hypothetical protein. | Hypothetical protein. | 0.764 |
VF_1520 | VF_A0207 | VF_1520 | VF_A0207 | Hypothetical protein. | Hypothetical protein. | 0.752 |
VF_1520 | VF_A1171 | VF_1520 | VF_A1171 | Hypothetical protein. | ParB family protein; Belongs to the ParB family. | 0.767 |
VF_1520 | rstA | VF_1520 | VF_A0581 | Hypothetical protein. | RstA2 protein; Cryptic phage CTXphi. | 0.755 |
VF_1520 | sypJ | VF_1520 | VF_A1029 | Hypothetical protein. | Glycosyl transferases group 1; Syp polysaccharide locus. | 0.762 |
VF_1541 | VF_1542 | VF_1541 | VF_1542 | Phosphohydrolase (MutT/nudix family protein). | Acetyltransferase. | 0.822 |
VF_1541 | VF_2497 | VF_1541 | VF_2497 | Phosphohydrolase (MutT/nudix family protein). | Hypothetical protein. | 0.455 |
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