STRINGSTRING
psd protein (Vibrio fischeri) - STRING interaction network
"psd" - Phosphatidylserine decarboxylase proenzyme in Vibrio fischeri
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
psdPhosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) (287 aa)    
Predicted Functional Partners:
pssA
annotation not available (450 aa)
      
  0.950
cls
Cardiolipin synthase A; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol (484 aa)
      
  0.925
pldA
annotation not available (257 aa)
          
    0.900
rsgA
Small ribosomal subunit biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit (354 aa)
 
        0.897
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (372 aa)
   
   
  0.741
orn
Oligoribonuclease; 3’-to-5’ exoribonuclease specific for small oligoribonucleotides (181 aa)
 
        0.664
pgsA
annotation not available (184 aa)
 
 
  0.663
VF_2332
annotation not available (296 aa)
   
        0.594
thiK
annotation not available (278 aa)
      
 
  0.528
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (210 aa)
      
   
  0.519
Your Current Organism:
Vibrio fischeri
NCBI taxonomy Id: 312309
Other names: Aliivibrio fischeri ES114, V. fischeri ES114, Vibrio fischeri, Vibrio fischeri ES114, Vibrio fischeri str. ES114, Vibrio fischeri strain ES114
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