STRINGSTRING
JNB_00020 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_00020" - No annotation available in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_00020No annotation available (284 aa)    
Predicted Functional Partners:
JNB_00025
No annotation available (335 aa)
 
 
  0.995
JNB_05605
dTDP-4-dehydrorhamnose 3,5-epimerase (197 aa)
 
  0.994
JNB_18028
Capsular polysaccharide synthesis enzyme CapF (368 aa)
   
  0.978
JNB_00025
dTDP-glucose 4,6-dehydratase (335 aa)
 
 
  0.967
JNB_00030
No annotation available (292 aa)
 
  0.909
metK
Methionine adenosyltransferase ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (406 aa)
     
  0.897
JNB_14763
Putative epimerase (352 aa)
   
  0.887
JNB_03685
Putative nucleotide-sugar dehydratase (314 aa)
   
  0.887
JNB_05485
Putative GDP-D-mannose dehydratase (314 aa)
   
  0.853
JNB_03055
MetH (1266 aa)
     
 
  0.818
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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