STRINGSTRING
JNB_00145 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_00145" - Putative DNA-binding protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_00145Putative DNA-binding protein (258 aa)    
Predicted Functional Partners:
JNB_00150
Putative integral membrane protein (793 aa)
 
   
  0.980
JNB_16289
Putative transcriptional regulator (341 aa)
 
     
  0.726
JNB_11199
Cell envelope-related transcriptional attenuator (520 aa)
 
          0.682
JNB_00140
Uncharacterized protein (40 aa)
              0.662
JNB_18498
Cell envelope-related transcriptional attenuator (335 aa)
 
     
  0.615
JNB_20508
Nicotinate mononucleotide adenylyltransferase ; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) (207 aa)
 
        0.607
rsfS
Ribosomal silencing factor RsfS ; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (125 aa)
 
        0.564
JNB_15473
Cell envelope-related transcriptional attenuator (509 aa)
 
          0.544
JNB_03675
30S ribosomal protein S1 (502 aa)
 
          0.506
whiA
Putative sporulation transcription regulator WhiA ; May be required for sporulation (334 aa)
 
     
  0.491
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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