STRINGSTRING
JNB_00300 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_00300" - Putative ribosylglycohydrolase in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_00300Putative ribosylglycohydrolase (482 aa)    
Predicted Functional Partners:
JNB_00305
Uncharacterized protein (224 aa)
              0.676
JNB_00310
Uncharacterized protein (539 aa)
 
          0.675
JNB_19663
Putative nitrogen regulatory protein P-II (112 aa)
       
 
  0.657
JNB_18338
Carbohydrate kinase, PfkB family protein (303 aa)
   
      0.486
JNB_17463
Ribokinase (276 aa)
   
      0.486
JNB_17173
Carbohydrate kinase, PfkB family protein (381 aa)
   
      0.486
JNB_15448
Putative sugar kinase (314 aa)
   
      0.486
JNB_13798
Sugar kinase, ribokinase family protein (324 aa)
   
      0.486
JNB_07984
Uncharacterized protein (311 aa)
   
      0.486
JNB_06859
Putative carbohydrate kinase (397 aa)
   
      0.486
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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