STRINGSTRING
JNB_00690 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_00690" - Putative DNA-binding protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_00690Putative DNA-binding protein (266 aa)    
Predicted Functional Partners:
JNB_00700
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (321 aa)
              0.750
lspA
Signal peptidase II ; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (184 aa)
              0.750
JNB_00705
DNA-directed DNA polymerase (1204 aa)
 
          0.608
JNB_00685
Wag31 (505 aa)
              0.547
JNB_00710
Protease II (738 aa)
              0.476
JNB_00680
Uncharacterized protein (91 aa)
              0.427
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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