STRINGSTRING
JNB_01405 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_01405" - Transcriptional regulator, PadR family protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_01405Transcriptional regulator, PadR family protein (115 aa)    
Predicted Functional Partners:
JNB_01400
Uncharacterized protein (174 aa)
              0.859
JNB_17838
Uncharacterized protein (114 aa)
   
          0.778
JNB_14558
Uncharacterized protein (112 aa)
   
          0.768
JNB_01410
Putative carbohydrate kinase (327 aa)
              0.652
aat
Phenyalanyltransferase ; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine (228 aa)
              0.629
JNB_17338
Transport permease protein (282 aa)
         
  0.432
JNB_09359
Transport permease protein (244 aa)
         
  0.432
JNB_06424
Transport permease protein (269 aa)
         
  0.432
JNB_03385
Putative integral membrane transport protein (253 aa)
         
  0.432
JNB_01275
Putative membrane protein (270 aa)
         
  0.432
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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