STRINGSTRING
JNB_01600 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_01600" - Putative transcriptional regulatory protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_01600Putative transcriptional regulatory protein (129 aa)    
Predicted Functional Partners:
JNB_01590
Serine/threonine kinase (648 aa)
              0.692
JNB_04430
Uncharacterized protein (231 aa)
    
          0.672
JNB_03140
Uncharacterized protein (130 aa)
    
          0.666
JNB_01595
Uncharacterized protein (375 aa)
              0.662
JNB_16629
Uncharacterized protein (248 aa)
    
          0.632
JNB_05979
Uncharacterized protein (218 aa)
    
          0.620
JNB_01230
Integral membrane protein (243 aa)
    
          0.609
JNB_03385
Putative integral membrane transport protein (253 aa)
    
          0.586
JNB_17588
Uncharacterized protein (114 aa)
    
          0.555
JNB_19418
Uncharacterized protein (312 aa)
    
          0.544
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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