Automated, unsupervised textmining - searching for proteins that are frequently mentioned together.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Uncharacterized protein (255 aa)
Predicted Functional Partners:
Uncharacterized protein (239 aa)
Uncharacterized protein (99 aa)
Uncharacterized protein (122 aa)
Deoxyuridine 5’-triphosphate nucleotidohydrolase ; This enzyme is involved in nucleotide metabolism- it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA (129 aa)
Integral membrane protein (243 aa)
Uncharacterized protein (96 aa)
Uncharacterized protein (193 aa)
Uncharacterized protein (91 aa)
Putative integral membrane protein (169 aa)
Transcriptional regulator WhiB ; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (82 aa)
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589 Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649