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JNB_01950 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_01950" - GAF domain protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_01950GAF domain protein (619 aa)    
Predicted Functional Partners:
JNB_01980
Putative 3-hydroxybutyrate dehydrogenase (249 aa)
 
          0.807
JNB_01960
Uncharacterized protein (235 aa)
              0.631
JNB_01955
ABC branched-chain amino acid family transporter, ATPase subunit (285 aa)
              0.631
JNB_08839
Putative secreted hydrolase (351 aa)
   
          0.610
JNB_11954
Uncharacterized protein (122 aa)
   
          0.557
JNB_14543
Putative secreted hydrolase (311 aa)
   
          0.550
JNB_14208
Putative integral membrane protein (277 aa)
   
          0.532
JNB_03325
Uncharacterized protein (177 aa)
   
          0.493
JNB_19653
Uncharacterized protein (130 aa)
   
          0.465
JNB_13143
Uncharacterized protein (271 aa)
   
          0.465
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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