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JNB_02775 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_02775" - Putative transcriptional regulator in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_02775Putative transcriptional regulator (155 aa)    
Predicted Functional Partners:
JNB_02770
Putative lyase (136 aa)
 
          0.962
JNB_18703
Uncharacterized protein (309 aa)
   
 
  0.749
JNB_12788
Base-excision DNA repair protein (213 aa)
   
 
  0.749
JNB_19258
Methylated-DNA--protein-cysteine methyltransferase (190 aa)
   
 
  0.673
JNB_11939
Putative DNA-methyltransferase (184 aa)
   
 
  0.673
JNB_11194
Putative methylated-DNA--protein-cysteine S-methyltransferase (178 aa)
   
 
  0.673
JNB_02780
Acetyltransferase, putative (153 aa)
              0.651
sigA
RNA polymerase sigma factor SigA ; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (546 aa)
       
      0.577
JNB_04870
Putative alkylated DNA repair protein (207 aa)
   
   
  0.499
JNB_14108
Putative DeoR-family transcriptional regulator (324 aa)
   
          0.476
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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