STRINGSTRING
JNB_02920 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_02920" - Transcriptional regulator-like protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_02920Transcriptional regulator-like protein (329 aa)    
Predicted Functional Partners:
JNB_02915
Uncharacterized protein (323 aa)
        0.991
tatA
Sec-independent protein translocase protein TatA ; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system (98 aa)
              0.841
JNB_02895
Putative ATP-dependent RNA helicase (956 aa)
 
        0.776
JNB_02925
Uncharacterized protein (366 aa)
              0.749
tatC
Sec-independent protein translocase protein TatC ; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides (256 aa)
              0.721
JNB_02900
Uncharacterized protein (299 aa)
              0.694
JNB_04540
Zn-ribbon protein-like protein (245 aa)
   
        0.591
JNB_03150
Uncharacterized protein (446 aa)
   
          0.573
JNB_16584
Uncharacterized protein (99 aa)
   
          0.566
JNB_01440
Cytochrome c oxidase polypeptide IV ; Part of cytochrome c oxidase, its function is unknown (134 aa)
   
          0.559
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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