STRINGSTRING
JNB_03620 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_03620" - GFO/IDH/MOCA family oxidoreductase in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_03620GFO/IDH/MOCA family oxidoreductase (354 aa)    
Predicted Functional Partners:
JNB_10339
Putative DNA-binding protein (342 aa)
 
 
  0.879
JNB_13793
Putative myo-inositol catabolism protein (304 aa)
 
 
  0.878
JNB_09374
Uncharacterized protein (279 aa)
   
 
  0.857
JNB_18028
Capsular polysaccharide synthesis enzyme CapF (368 aa)
   
 
  0.838
JNB_18548
Aspartate aminotransferase (365 aa)
 
 
  0.815
JNB_18053
Putative aminotransferase (380 aa)
 
 
  0.815
JNB_14948
Putative dehydrogenase (351 aa)
   
  0.764
JNB_14823
Zinc-binding dehydrogenase (355 aa)
   
  0.764
tdh
L-threonine 3-dehydrogenase (350 aa)
   
  0.764
JNB_18558
Putative UDP-N-acetylglucosamine 2-epimerase (356 aa)
   
 
  0.757
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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