STRINGSTRING
JNB_03995 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_03995" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_03995Uncharacterized protein (105 aa)    
Predicted Functional Partners:
JNB_03980
Phosphopantothenoylcysteine synthase/decarboxylase (436 aa)
 
          0.895
rpoZ
Transcriptase subunit omega ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (87 aa)
 
          0.894
gmk
GMP kinase ; Essential for recycling GMP and indirectly, cGMP (192 aa)
              0.880
pyrD
Dihydroorotate dehydrogenase ; Catalyzes the conversion of dihydroorotate to orotate (320 aa)
              0.701
pyrF
OMP decarboxylase (294 aa)
              0.701
pyrR
Bifunctional protein PyrR ; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant (200 aa)
              0.691
pyrB
Aspartate transcarbamylase (348 aa)
              0.691
pyrC
Dihydroorotase (430 aa)
              0.691
carA
Carbamoyl-phosphate synthetase glutamine chain (385 aa)
              0.691
carB
Carbamoyl-phosphate synthetase ammonia chain (1105 aa)
              0.691
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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