STRINGSTRING
JNB_04185 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_04185" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_04185Uncharacterized protein (389 aa)    
Predicted Functional Partners:
JNB_04180
Putative shikimate 5-dehydrogenase (271 aa)
   
   
  0.926
JNB_04190
Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (161 aa)
   
   
  0.921
JNB_04175
Uncharacterized protein (232 aa)
              0.872
JNB_04170
Putative acetyltransferase (147 aa)
              0.859
alaS
Alanyl-tRNA synthetase ; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (897 aa)
   
        0.830
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (529 aa)
       
    0.819
JNB_03055
MetH (1266 aa)
       
    0.807
JNB_03865
Putative anthranilate synthase component I (522 aa)
   
 
    0.760
JNB_02290
Putative anthranilate synthase (348 aa)
   
 
    0.760
JNB_02295
Putative D-alanine aminotransferase (282 aa)
   
    0.750
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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