STRINGSTRING
JNB_04510 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_04510" - Short chain dehydrogenase in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_04510Short chain dehydrogenase (280 aa)    
Predicted Functional Partners:
JNB_12598
Putative oxidoreductase (253 aa)
    
   
    0.628
JNB_12798
Hypothetical short chain dehydrogenase (217 aa)
    
   
 
0.586
JNB_02345
3-ketoacyl-(Acyl-carrier-protein) reductase (445 aa)
    
   
    0.578
JNB_10574
Short chain dehydrogenase (308 aa)
    
   
 
0.564
JNB_05120
3-oxoacyl-[acyl-carrier protein] reductase (263 aa)
    
   
 
0.559
JNB_14063
Putative oxidoreductase (273 aa)
       
    0.538
JNB_00450
Short chain dehydrogenase (314 aa)
       
    0.538
JNB_10659
Uncharacterized protein (499 aa)
       
    0.527
JNB_19108
Putative acyl-CoA synthetase, long-chain fatty acid-CoA ligase (507 aa)
     
    0.524
JNB_18638
Acyl-CoA synthase (559 aa)
       
    0.524
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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