STRINGSTRING
JNB_04855 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_04855" - Calcium/proton exchanger in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_04855Calcium/proton exchanger (361 aa)    
Predicted Functional Partners:
JNB_04860
Uncharacterized protein (340 aa)
 
          0.659
recO
Recombination protein O ; Involved in DNA repair and RecF pathway recombination (241 aa)
              0.642
JNB_04845
Isoprenyl transferase ; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (271 aa)
              0.640
JNB_12778
Uncharacterized protein (903 aa)
    
          0.526
JNB_04870
Putative alkylated DNA repair protein (207 aa)
   
        0.416
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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