STRINGSTRING
JNB_04975 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_04975" - Choline/carnitine/betaine transporter family protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_04975Choline/carnitine/betaine transporter family protein (616 aa)    
Predicted Functional Partners:
asd
Aspartate-beta-semialdehyde dehydrogenase ; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate (344 aa)
              0.709
JNB_10479
Possible GMC-type oxidoreductase (531 aa)
   
   
  0.568
JNB_06229
Putative oxidoreductase (540 aa)
   
   
  0.568
JNB_11679
Uncharacterized protein (305 aa)
     
      0.545
htpX
Protease HtpX homolog (296 aa)
     
      0.545
JNB_04985
Putative membrane protein (434 aa)
              0.486
era
GTPase Era ; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (317 aa)
              0.486
JNB_17568
Putative cholesterol oxidase (591 aa)
   
   
  0.452
JNB_19328
Uncharacterized protein (304 aa)
              0.420
JNB_04995
PhoH-like protein (359 aa)
              0.402
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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