STRINGSTRING
JNB_05000 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_05000" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_05000Uncharacterized protein (115 aa)    
Predicted Functional Partners:
ybeY
Endoribonuclease YbeY ; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (155 aa)
   
        0.886
JNB_04995
PhoH-like protein (359 aa)
              0.883
era
GTPase Era ; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (317 aa)
   
        0.790
JNB_04985
Putative membrane protein (434 aa)
              0.786
JNB_04285
Putative membrane protein (259 aa)
            0.765
ndk
Nucleoside-2-P kinase ; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (140 aa)
   
    0.702
JNB_05005
Putative RNA polymerase ECF-subfamily sigma factor (178 aa)
              0.678
JNB_05010
Uncharacterized protein (366 aa)
              0.653
JNB_03805
Pyruvate kinase (487 aa)
   
 
  0.622
dnaK
Heat shock protein 70 ; Acts as a chaperone (636 aa)
   
 
  0.572
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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