STRINGSTRING
JNB_05110 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_05110" - Putative DNA-binding protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_05110Putative DNA-binding protein (331 aa)    
Predicted Functional Partners:
JNB_10179
DNA polymerase III subunits gamma and tau (799 aa)
   
  0.990
JNB_13403
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (377 aa)
 
  0.980
JNB_09554
ATPase (379 aa)
   
  0.978
JNB_00705
DNA-directed DNA polymerase (1204 aa)
   
  0.963
JNB_01680
DNA-directed DNA polymerase (1282 aa)
     
  0.946
JNB_01505
Uncharacterized protein (572 aa)
       
  0.904
JNB_03775
DNA polymerase (889 aa)
     
 
  0.887
JNB_05115
Putative ATP-dependent helicase (761 aa)
   
 
  0.820
JNB_01230
Integral membrane protein (243 aa)
   
        0.767
JNB_02660
Uncharacterized protein (198 aa)
   
          0.757
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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