STRINGSTRING
JNB_05190 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_05190" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_05190Uncharacterized protein (309 aa)    
Predicted Functional Partners:
JNB_03055
MetH (1266 aa)
         
  0.882
JNB_17243
Putative cystathionine beta-synthase (458 aa)
     
  0.836
metK
Methionine adenosyltransferase ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (406 aa)
       
  0.673
JNB_00520
O-acetylhomoserine sulfhydrylase (445 aa)
       
  0.637
JNB_19518
Putative L,L-Cystathionine gamma-Lyase (358 aa)
   
 
  0.635
JNB_17308
Cystathionine gamma-synthase (395 aa)
   
 
  0.635
JNB_07089
Putative cystathionine gamma-synthase (399 aa)
   
 
  0.635
JNB_04530
Putative O-succinylhomoserine sulfhydrylase (402 aa)
   
 
  0.635
JNB_11294
Cysteine synthase (312 aa)
     
 
  0.630
JNB_17343
Putative threonine dehydratase (417 aa)
     
 
  0.621
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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