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JNB_05210 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_05210" - Ribonuclease H in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_05210Ribonuclease H (302 aa)    
Predicted Functional Partners:
JNB_03775
DNA polymerase (889 aa)
   
  0.964
JNB_01505
Uncharacterized protein (572 aa)
   
 
  0.729
hemL
Glutamate-1-semialdehyde aminotransferase (448 aa)
            0.701
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (529 aa)
   
   
  0.691
JNB_02890
Putative 5’-3’ exonuclease (333 aa)
   
  0.684
recA
Recombinase A ; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (354 aa)
   
 
  0.668
JNB_05205
Putative acyltransferase (152 aa)
              0.657
JNB_16229
Uncharacterized protein (303 aa)
   
  0.654
JNB_03620
GFO/IDH/MOCA family oxidoreductase (354 aa)
 
        0.654
JNB_00995
Transfer protein Tra-like (1920 aa)
   
 
  0.638
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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