STRINGSTRING
JNB_05280 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_05280" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_05280Uncharacterized protein (317 aa)    
Predicted Functional Partners:
JNB_05285
Uncharacterized protein (318 aa)
           
0.585
JNB_05275
Uncharacterized protein (325 aa)
           
0.576
JNB_05290
Putative dipeptidase (394 aa)
              0.560
rimO
Ribosome maturation factor RimO ; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 (466 aa)
              0.422
JNB_05265
Putative phosphatidyltransferase (218 aa)
              0.422
JNB_05260
Uncharacterized protein (168 aa)
              0.422
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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