STRINGSTRING
JNB_05435 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_05435" - Uncharacterized protein in Janibacter sp. HTCC2649
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_05435Uncharacterized protein (295 aa)    
Predicted Functional Partners:
JNB_15823
Putative lipoprotein (214 aa)
   
 
      0.749
pnp
Polynucleotide phosphorylase ; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (807 aa)
 
          0.672
pth
Peptidyl-tRNA hydrolase ; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (196 aa)
   
          0.669
JNB_16284
UPF0678 fatty acid-binding protein-like protein JNB_16284 ; May play a role in the intracellular transport of hydrophobic ligands (169 aa)
   
          0.661
JNB_12913
Uncharacterized protein (158 aa)
   
          0.659
JNB_13048
Putative reductase (204 aa)
   
          0.648
JNB_05045
Putative oxygen-independent coproporphyrinogen III oxidase (424 aa)
   
          0.637
JNB_13643
Putative adenine glycosylase (304 aa)
   
          0.601
prmC
Protein-glutamine N-methyltransferase PrmC ; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif (285 aa)
   
          0.593
rplQ
50S ribosomal protein L17 (237 aa)
   
          0.536
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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