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JNB_05605 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_05605" - dTDP-4-dehydrorhamnose 3,5-epimerase in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_05605dTDP-4-dehydrorhamnose 3,5-epimerase (197 aa)    
Predicted Functional Partners:
JNB_00020
dTDP-4-dehydrorhamnose reductase (284 aa)
 
  0.994
JNB_00020
No annotation available (284 aa)
 
  0.994
JNB_05610
Glucose-1-phosphate thymidylyltransferase (231 aa)
   
  0.974
JNB_00025
dTDP-glucose 4,6-dehydratase (335 aa)
 
 
  0.943
JNB_00025
No annotation available (335 aa)
 
 
  0.943
JNB_14763
Putative epimerase (352 aa)
   
  0.894
JNB_03685
Putative nucleotide-sugar dehydratase (314 aa)
   
  0.894
JNB_05485
Putative GDP-D-mannose dehydratase (314 aa)
   
  0.862
JNB_18063
Cell surface polysaccharide biosynthesis / Chain length determinant protein (479 aa)
   
   
  0.851
JNB_18058
Probable dtdp-glucose 4,6-dehydratase transmembrane protein (603 aa)
   
 
  0.844
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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