STRINGSTRING
JNB_05994 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_05994" - ATP-dependent DNA helicase in Janibacter sp. HTCC2649
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_05994ATP-dependent DNA helicase (707 aa)    
Predicted Functional Partners:
JNB_03775
DNA polymerase (889 aa)
   
  0.968
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (942 aa)
   
  0.945
recA
Recombinase A ; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (354 aa)
     
  0.926
JNB_02890
Putative 5’-3’ exonuclease (333 aa)
   
  0.890
sbcD
Nuclease SbcCD subunit D ; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (390 aa)
   
  0.884
JNB_17723
DNA helicase (838 aa)
   
  0.878
JNB_07399
DNA helicase (729 aa)
 
  0.878
JNB_07424
DNA helicase (1047 aa)
   
  0.856
JNB_07419
Putative DNA helicase (1103 aa)
   
  0.856
JNB_12399
ATP-dependent RNA helicase (514 aa)
 
  0.843
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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