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JNB_06119 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_06119" - Single-strand DNA-binding protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_06119Single-strand DNA-binding protein (173 aa)    
Predicted Functional Partners:
JNB_10179
DNA polymerase III subunits gamma and tau (799 aa)
   
 
  0.864
JNB_00995
Transfer protein Tra-like (1920 aa)
   
 
  0.851
rpsR
30S ribosomal protein S18 ; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (73 aa)
   
   
  0.851
rpsF
30S ribosomal protein S6 ; Binds together with S18 to 16S ribosomal RNA (95 aa)
   
   
  0.844
JNB_01680
DNA-directed DNA polymerase (1282 aa)
   
 
  0.834
JNB_00705
DNA-directed DNA polymerase (1204 aa)
   
 
  0.834
rpoZ
Transcriptase subunit omega ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (87 aa)
   
   
  0.800
JNB_06114
Carbomycin resistance ATPase (560 aa)
   
        0.782
JNB_19038
Transcriptional regulator WhiB ; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (82 aa)
   
        0.777
JNB_18738
Transcriptional regulator WhiB ; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (114 aa)
   
          0.763
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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