Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Single-strand DNA-binding protein (173 aa)
Predicted Functional Partners:
DNA polymerase III subunits gamma and tau (799 aa)
Transfer protein Tra-like (1920 aa)
30S ribosomal protein S18 ; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (73 aa)
30S ribosomal protein S6 ; Binds together with S18 to 16S ribosomal RNA (95 aa)
DNA-directed DNA polymerase (1282 aa)
DNA-directed DNA polymerase (1204 aa)
Transcriptase subunit omega ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (87 aa)
Carbomycin resistance ATPase (560 aa)
Transcriptional regulator WhiB ; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (82 aa)
Transcriptional regulator WhiB ; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (114 aa)
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589 Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649