STRINGSTRING
JNB_06129 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_06129" - Putative ABC transporter in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_06129Putative ABC transporter (571 aa)    
Predicted Functional Partners:
JNB_06124
Putative ABC transporter (550 aa)
 
       
0.908
JNB_08134
Uncharacterized protein (417 aa)
   
          0.671
JNB_18443
Adenylyl cyclase class-3/4/guanylyl cyclase (364 aa)
   
          0.628
JNB_06119
Single-strand DNA-binding protein (173 aa)
              0.618
JNB_20033
Putative acetyltransferase (281 aa)
   
          0.605
JNB_01765
Uncharacterized protein (222 aa)
   
          0.552
valS
Valyl-tRNA synthetase ; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a "posttransfer" editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner (895 aa)
   
          0.548
JNB_16639
Uncharacterized protein (215 aa)
   
          0.538
JNB_06134
Uncharacterized protein (123 aa)
              0.531
JNB_16629
Uncharacterized protein (248 aa)
   
          0.530
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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