STRINGSTRING
JNB_06399 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_06399" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_06399Uncharacterized protein (286 aa)    
Predicted Functional Partners:
JNB_06404
Putative fumarylacetoacetase (409 aa)
 
          0.951
JNB_06394
Putative dioxygenase (416 aa)
 
          0.936
JNB_06449
Putative 4-hydroxyphenylpyruvate dioxygenase (420 aa)
 
          0.709
JNB_01315
Uncharacterized protein (109 aa)
   
          0.659
JNB_16948
Uncharacterized protein (1203 aa)
   
          0.572
JNB_12199
Uncharacterized protein (405 aa)
   
          0.541
JNB_13483
Putative DNA-binding protein (378 aa)
   
          0.480
JNB_17923
Transcriptional regulator (429 aa)
   
          0.459
JNB_03720
Uncharacterized protein (575 aa)
   
          0.455
JNB_10944
Uncharacterized protein (56 aa)
   
          0.451
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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