STRINGSTRING
JNB_06494 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_06494" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_06494Uncharacterized protein (96 aa)    
Predicted Functional Partners:
JNB_01355
Uncharacterized protein (193 aa)
   
          0.778
JNB_01230
Integral membrane protein (243 aa)
   
          0.778
JNB_01795
Uncharacterized protein (99 aa)
   
          0.774
JNB_01805
Uncharacterized protein (255 aa)
   
          0.769
JNB_02500
Uncharacterized protein (580 aa)
   
          0.759
JNB_06819
Putative thioredoxin (330 aa)
 
          0.758
JNB_13313
Putative integral membrane protein (169 aa)
   
          0.758
JNB_19038
Transcriptional regulator WhiB ; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (82 aa)
   
          0.755
rpoZ
Transcriptase subunit omega ; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (87 aa)
   
          0.752
JNB_02660
Uncharacterized protein (198 aa)
   
          0.740
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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