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JNB_06499 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_06499" - UPF0301 protein JNB_06499 in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_06499UPF0301 protein JNB_06499 (212 aa)    
Predicted Functional Partners:
JNB_06504
ATP-dependent RNA helicase (774 aa)
              0.861
JNB_06494
Uncharacterized protein (96 aa)
              0.724
JNB_06514
Putative malate oxidoreductase (490 aa)
              0.582
JNB_06509
Uncharacterized protein (120 aa)
              0.580
JNB_04190
Putative pre-16S rRNA nuclease ; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (161 aa)
   
   
  0.577
JNB_19098
Uncharacterized protein (333 aa)
   
          0.537
JNB_05015
Ribosomal RNA small subunit methyltransferase E ; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (247 aa)
   
 
  0.486
JNB_18663
Ribosomal protein S6 modification protein (396 aa)
   
        0.469
gshB
Glutathione synthase (348 aa)
   
        0.438
JNB_05929
Putative integral membrane protein (368 aa)
   
          0.438
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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