STRINGSTRING
JNB_06604 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_06604" - Peptide chain release factor 2 in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_06604Peptide chain release factor 2 (467 aa)    
Predicted Functional Partners:
JNB_02360
Uncharacterized protein (256 aa)
    
          0.736
JNB_20058
Uncharacterized protein (167 aa)
    
          0.652
JNB_06609
Uncharacterized protein (157 aa)
              0.636
JNB_13083
Putative transmembrane transport protein (346 aa)
    
          0.608
prfB
Peptide chain release factor 2 ; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA (370 aa)
              0.550
JNB_10344
Uncharacterized protein (373 aa)
    
          0.498
JNB_12094
Putative membrane protein (483 aa)
    
          0.496
JNB_17593
Secreted extracellular small neutral protease (214 aa)
    
          0.485
JNB_01370
Esterase, PHB depolymerase (408 aa)
 
          0.481
JNB_06619
Integral membrane protein (226 aa)
              0.481
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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