STRINGSTRING
JNB_07229 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_07229" - Ferritin in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_07229Ferritin ; Iron-storage protein (179 aa)    
Predicted Functional Partners:
JNB_07224
RNA polymerase sigma-70 factor (196 aa)
              0.573
JNB_07219
Anti-sigma factor (104 aa)
              0.565
JNB_02945
Putative alkyl hydroperoxide reductase (211 aa)
   
   
  0.527
JNB_16769
Iron-dependent repressor, DxtR metalloregulatory family protein (235 aa)
 
     
  0.525
JNB_11119
Uncharacterized protein (168 aa)
              0.420
JNB_07779
Putative reductase (171 aa)
              0.420
JNB_03775
DNA polymerase (889 aa)
           
  0.416
tig
PPIase ; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase (454 aa)
       
 
  0.402
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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