STRINGSTRING
JNB_07494 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_07494" - Uncharacterized protein in Janibacter sp. HTCC2649
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_07494Uncharacterized protein (281 aa)    
Predicted Functional Partners:
purU
Formyl-FH(4) hydrolase ; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) (296 aa)
              0.859
rnc
Ribonuclease III ; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism (249 aa)
            0.739
JNB_07484
Uncharacterized protein (297 aa)
              0.729
JNB_07499
Putative RNA polymerase ECF-subfamily sigma factor (168 aa)
              0.615
JNB_07504
Uncharacterized protein (286 aa)
              0.611
JNB_02700
Uncharacterized protein (207 aa)
 
        0.552
JNB_08914
Putative oxidoreductase (624 aa)
       
    0.547
JNB_20138
Cobyrinic acid A,C-diamide synthase, CbiA (821 aa)
       
    0.525
JNB_07569
Aminopeptidase P (499 aa)
 
          0.495
JNB_02550
Pseudouridine synthase (306 aa)
     
      0.494
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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