STRINGSTRING
JNB_07724 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_07724" - Succinyl-diaminopimelate desuccinylase in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_07724Succinyl-diaminopimelate desuccinylase (360 aa)    
Predicted Functional Partners:
JNB_07759
Uncharacterized protein (351 aa)
 
 
  0.914
dapF
Diaminopimelate epimerase ; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (300 aa)
 
   
  0.885
JNB_07719
Cytokinin riboside 5’-monophosphate phosphoribohydrolase (276 aa)
              0.879
dapD
Tetrahydropicolinate succinylase ; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA (307 aa)
 
   
  0.861
argD
Acetylornithine aminotransferase (404 aa)
   
 
  0.849
JNB_04350
Ornithine carbamoyltransferase ; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (318 aa)
   
 
  0.846
argG
Citrulline--aspartate ligase (475 aa)
   
  0.835
JNB_02090
Putative oxidoreductase (943 aa)
   
  0.832
JNB_03815
Putative glutamate synthase (NADPH) large subunit (1514 aa)
       
  0.812
JNB_00465
RocD1 (409 aa)
   
 
  0.804
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
Server load: low (11%) [HD]