STRINGSTRING
JNB_07939 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_07939" - DNA recombination protein RmuC-like in Janibacter sp. HTCC2649
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_07939DNA recombination protein RmuC-like (408 aa)    
Predicted Functional Partners:
JNB_07934
Uncharacterized protein (308 aa)
              0.805
ychF
Ribosome-binding ATPase YchF ; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner (361 aa)
              0.715
JNB_07929
Putative pyrophosphohydrolase (177 aa)
              0.611
JNB_07924
Uncharacterized protein (74 aa)
              0.611
fmt
Methionyl-tRNA formyltransferase ; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by- (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (322 aa)
 
          0.557
JNB_08074
tRNA-uridine isomerase I ; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (283 aa)
              0.420
def
Polypeptide deformylase ; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (217 aa)
              0.420
JNB_07989
Fumarate hydratase class I (571 aa)
              0.418
menG
Demethylmenaquinone methyltransferase ; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) (231 aa)
              0.412
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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