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JNB_07954 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_07954" - Putative integral membrane protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_07954Putative integral membrane protein (123 aa)    
Predicted Functional Partners:
JNB_17493
Uncharacterized protein (292 aa)
   
          0.680
JNB_07959
Putative transcriptional regulator (221 aa)
              0.648
JNB_07969
Exodeoxyribonuclease 7 small subunit ; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (92 aa)
              0.576
xseA
Exodeoxyribonuclease VII large subunit ; Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (414 aa)
              0.576
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase ; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (341 aa)
              0.573
JNB_07944
Possible secreted peptidase (221 aa)
              0.552
JNB_11269
Putative protease (525 aa)
   
          0.551
JNB_00995
Transfer protein Tra-like (1920 aa)
   
          0.536
JNB_15673
Putative transcriptional regulator (261 aa)
   
          0.531
JNB_02735
Putative two-component system sensor kinase (365 aa)
   
          0.491
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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