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JNB_08504 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_08504" - 4-aminobutyrate aminotransferase in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_085044-aminobutyrate aminotransferase (452 aa)    
Predicted Functional Partners:
JNB_08534
Putative aldehyde dehydrogenase (481 aa)
 
  0.970
JNB_08509
Putative ATP binding protein (427 aa)
   
 
  0.950
JNB_15943
Glutamate decarboxylase (476 aa)
   
  0.947
JNB_13823
Methylmalonate-semialdehyde dehydrogenase (500 aa)
 
  0.928
JNB_19943
Succinate-semialdehyde dehydrogenase (NAD(P)+) (484 aa)
   
  0.913
JNB_19348
Probable aldehyde dehydrogenase AldC (457 aa)
   
  0.913
JNB_18213
Putative aldehyde dehydrogenase (482 aa)
   
  0.913
gabD2
Succinic semialdehyde dehydrogenase (529 aa)
   
  0.913
JNB_10474
Putative aldehyde dehydrogenase (492 aa)
   
  0.913
JNB_09159
Putative aldehyde dehydrogenase (505 aa)
   
  0.913
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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