STRINGSTRING
JNB_08569 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_08569" - Spermidine synthase in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_08569Spermidine synthase (526 aa)    
Predicted Functional Partners:
JNB_08574
Uncharacterized protein (142 aa)
 
        0.968
JNB_08584
Uncharacterized protein (192 aa)
 
          0.936
JNB_08589
Uncharacterized protein (52 aa)
              0.662
JNB_08579
Uncharacterized protein (77 aa)
              0.662
JNB_08544
Uncharacterized protein (467 aa)
   
   
    0.594
JNB_15778
Conserved protein (Putative spermidine synthase) (266 aa)
       
    0.531
JNB_08509
Putative ATP binding protein (427 aa)
       
    0.477
JNB_08594
Uncharacterized protein (62 aa)
              0.438
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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