STRINGSTRING
JNB_08574 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_08574" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_08574Uncharacterized protein (142 aa)    
Predicted Functional Partners:
JNB_08569
Spermidine synthase (526 aa)
 
        0.968
JNB_08584
Uncharacterized protein (192 aa)
 
          0.913
JNB_08589
Uncharacterized protein (52 aa)
              0.662
JNB_08579
Uncharacterized protein (77 aa)
              0.662
JNB_07244
Uncharacterized protein (169 aa)
   
          0.573
JNB_19688
Uncharacterized protein (158 aa)
   
          0.556
JNB_19838
Putative lipoprotein (396 aa)
   
          0.548
JNB_00215
Uncharacterized protein (177 aa)
   
          0.519
JNB_12029
Uncharacterized protein (311 aa)
   
          0.512
JNB_16574
Putative lipoprotein (263 aa)
   
          0.511
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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