STRINGSTRING
JNB_08874 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_08874" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_08874Uncharacterized protein (937 aa)    
Predicted Functional Partners:
JNB_04580
Putative two component system histidine kinase (404 aa)
   
        0.633
JNB_15583
Two-component system, sensor protein (404 aa)
   
        0.626
JNB_03065
Putative integral membrane protein (420 aa)
   
          0.625
JNB_04575
Putative respose regulatory protein (217 aa)
   
          0.570
JNB_17643
Putative two-component system DNA-binding response regulator (238 aa)
   
          0.534
rpoB
Transcriptase subunit beta ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1162 aa)
     
 
    0.531
ndk
Nucleoside-2-P kinase ; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (140 aa)
       
    0.527
JNB_03805
Pyruvate kinase (487 aa)
       
    0.522
JNB_14878
Putative integral membrane protein (722 aa)
   
          0.518
JNB_08879
Uncharacterized protein (125 aa)
              0.504
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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