STRINGSTRING
JNB_09084 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_09084" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_09084Uncharacterized protein (404 aa)    
Predicted Functional Partners:
JNB_09089
Uncharacterized protein (89 aa)
              0.859
JNB_09079
Probable export protein (152 aa)
              0.859
menD
Menaquinone biosynthesis protein MenD ; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) (571 aa)
              0.859
JNB_09069
Putative flavoprotein (409 aa)
              0.771
JNB_09064
Uncharacterized protein (154 aa)
              0.771
JNB_16624
ESAT-6-like protein (96 aa)
   
          0.712
JNB_09094
Uncharacterized protein (297 aa)
              0.655
JNB_09059
Uncharacterized protein (139 aa)
              0.624
JNB_06649
Uncharacterized protein (289 aa)
   
          0.594
JNB_01355
Uncharacterized protein (193 aa)
   
          0.576
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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