STRINGSTRING
JNB_09499 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_09499" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_09499Uncharacterized protein (348 aa)    
Predicted Functional Partners:
JNB_09504
Putative D-alanyl-D-alanine carboxypeptidase (476 aa)
   
        0.911
tilS
tRNA(Ile)-lysidine synthetase ; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine (320 aa)
   
        0.894
ppa
Pyrophosphate phospho-hydrolase (212 aa)
              0.773
JNB_03095
Uncharacterized protein (169 aa)
   
        0.628
JNB_03090
Uncharacterized protein (263 aa)
   
        0.595
JNB_19098
Uncharacterized protein (333 aa)
   
        0.542
JNB_11924
Putative regulatory protein (157 aa)
   
          0.512
JNB_20033
Putative acetyltransferase (281 aa)
   
        0.509
JNB_01825
Potassium uptake protein (220 aa)
   
        0.474
JNB_01770
Uncharacterized protein (380 aa)
   
          0.462
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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