STRINGSTRING
nth protein (Janibacter sp. HTCC2649) - STRING interaction network
"nth" - DNA-(apurinic or apyrimidinic site) lyase in Janibacter sp. HTCC2649
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
nthDNA-(apurinic or apyrimidinic site) lyase ; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination, leaving a 3’-terminal unsaturated sugar and a product with a terminal 5’-phosphate (263 aa)    
Predicted Functional Partners:
JNB_18078
Exodeoxyribonuclease III (269 aa)
 
 
  0.967
JNB_15533
AP endonuclease, family 1-Exodeoxyribonuclease III xth (262 aa)
 
 
  0.904
JNB_10054
Uncharacterized protein (213 aa)
   
 
  0.862
JNB_03775
DNA polymerase (889 aa)
   
 
  0.818
JNB_10064
Putative transcriptional regulator with cyclic nucleotide-binding domain protein (225 aa)
 
        0.783
JNB_20563
Endonuclease IV (264 aa)
   
 
  0.683
JNB_01505
Uncharacterized protein (572 aa)
   
   
  0.667
JNB_16229
Uncharacterized protein (303 aa)
 
 
 
  0.647
JNB_17373
Isoprenyl transferase ; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (267 aa)
 
   
  0.633
JNB_03240
Cyanophycin synthetase (972 aa)
         
  0.574
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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