STRINGSTRING
JNB_10094 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_10094" - Uncharacterized protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_10094Uncharacterized protein (339 aa)    
Predicted Functional Partners:
JNB_10099
Putative ion-transporting ATPase (386 aa)
 
 
    0.991
JNB_01530
Uncharacterized protein (133 aa)
 
        0.796
JNB_10089
Uncharacterized protein (52 aa)
 
          0.796
JNB_10084
Translation initiation inhibitor (157 aa)
              0.748
secY
Protein translocase subunit SecY ; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (438 aa)
   
  0.700
JNB_10079
Uncharacterized protein (218 aa)
              0.687
JNB_09304
Uncharacterized protein (460 aa)
   
        0.679
JNB_14908
Uncharacterized protein (212 aa)
   
          0.657
JNB_11529
Putative acyl-CoA dehydrogenase (625 aa)
   
          0.613
JNB_07359
Putative ABC transporter ATP-binding protein (444 aa)
   
        0.610
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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