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xylA protein (Janibacter sp. HTCC2649) - STRING interaction network
"xylA" - Xylose isomerase in Janibacter sp. HTCC2649
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylAXylose isomerase (389 aa)    
Predicted Functional Partners:
JNB_14808
Xylulokinase (475 aa)
 
 
  0.954
JNB_10339
Putative DNA-binding protein (342 aa)
 
   
    0.904
JNB_12394
Putative sugar kinase (300 aa)
       
  0.846
JNB_01545
Putative sugar kinase (320 aa)
       
  0.846
JNB_10369
Transcriptional regulator, ROK family protein (409 aa)
       
  0.842
JNB_07619
Transcriptional regulator, Rok family protein (421 aa)
 
   
  0.800
JNB_14823
Zinc-binding dehydrogenase (355 aa)
   
 
  0.759
JNB_14828
Mannitol 2-dehydrogenase (498 aa)
         
  0.747
JNB_04495
Polyphosphate glucokinase/transcriptional regulator (256 aa)
       
  0.746
JNB_10349
Putative oxidoreductase (385 aa)
 
   
    0.740
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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