STRINGSTRING
JNB_10339 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_10339" - Putative DNA-binding protein in Janibacter sp. HTCC2649
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_10339Putative DNA-binding protein (342 aa)    
Predicted Functional Partners:
JNB_10349
Putative oxidoreductase (385 aa)
 
 
  0.978
xylA
Xylose isomerase (389 aa)
 
   
    0.904
JNB_13833
Oxidoreductase with transcriptional repressor domain (396 aa)
 
 
  0.880
JNB_03620
GFO/IDH/MOCA family oxidoreductase (354 aa)
 
 
  0.879
JNB_18553
NAD-dependent dehydrogenase (328 aa)
   
 
  0.857
iolG
Myo-inositol 2-dehydrogenase ; Involved in the oxidation of myo-inositol (MI) to 2- keto-myo-inositol (2KMI or 2-inosose) (355 aa)
   
 
  0.857
JNB_13788
Putative oxidoreductase (345 aa)
   
 
  0.857
JNB_01255
Putative oxidoreductase (353 aa)
   
 
  0.857
JNB_10354
Putative secreted solute binding protein (350 aa)
 
          0.817
JNB_10369
Transcriptional regulator, ROK family protein (409 aa)
 
   
    0.790
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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