STRINGSTRING
JNB_10384 protein (Janibacter sp. HTCC2649) - STRING interaction network
"JNB_10384" - Putative GntR-family transcriptional regulator in Janibacter sp. HTCC2649
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JNB_10384Putative GntR-family transcriptional regulator (242 aa)    
Predicted Functional Partners:
JNB_02090
Putative oxidoreductase (943 aa)
   
 
  0.716
JNB_10379
Putative ABC transporter substrate-binding protein (106 aa)
   
          0.709
JNB_19338
Putative transcriptional regulator (248 aa)
   
          0.672
JNB_10624
Uncharacterized protein (265 aa)
   
          0.644
JNB_11539
Putative oxidoreductase (459 aa)
   
 
    0.618
JNB_08934
FAD-dependent oxidoreductase (432 aa)
   
 
    0.618
JNB_00385
Possible alkyldihydroxyacetonephospate synthase (536 aa)
   
 
    0.618
JNB_10389
Uncharacterized protein (97 aa)
              0.565
JNB_10404
Membrane spanning protein (381 aa)
              0.557
JNB_10399
Uncharacterized protein (312 aa)
              0.557
Your Current Organism:
Janibacter sp. HTCC2649
NCBI taxonomy Id: 313589
Other names: J. sp. HTCC2649, Janibacter, Janibacter HTCC2649, Janibacter sp. HTCC2649
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